Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella atlantica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 5 |
| Temperature range | psychrophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella atlantica strain HAW-EB5
Accession NumberRXNV00000000.1
Gene Summary
Adenine Count
1494847 bp
Thymine Count
1426199 bp
Guanine Count
1189223 bp
Cytosine Count
1282213 bp
Genome Length
5394979 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
123 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EKG39_01400 | Not Available | + | 347332 - 347991 | 23790.2 |
| uracil-dna glycosylase family protein | EKG39_01405 | Not Available | + | 348032 - 348676 | 23852.3 |
| ggdef domain-containing protein | EKG39_01410 | Not Available | + | 348812 - 349783 | 37165.0 |
| hypothetical protein | EKG39_01415 | Not Available | + | 349927 - 350700 | 27760.6 |
| cdar family transcriptional regulator | EKG39_01420 | Not Available | + | 350887 - 352044 | 42979.2 |
| phospho-sugar mutase | EKG39_01430 | Not Available | - | 352352 - 354100 | 63251.1 |
| qace family quaternary ammonium compound efflux smr transporter | EKG39_01435 | Not Available | + | 354590 - 354916 | 11394.5 |
| rlua family pseudouridine synthase | EKG39_01440 | Not Available | + | 354984 - 355832 | 31863.3 |
| aldehyde dehydrogenase | EKG39_01445 | Not Available | - | 355900 - 357264 | 48814.6 |
| nuclear transport factor 2 family protein | EKG39_01450 | Not Available | - | 357305 - 357667 | 13732.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
