Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella atlantica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 5 |
| Temperature range | psychrophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella atlantica strain HAW-EB5
Accession NumberRXNV00000000.1
Gene Summary
Adenine Count
1494847 bp
Thymine Count
1426199 bp
Guanine Count
1189223 bp
Cytosine Count
1282213 bp
Genome Length
5394979 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
123 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| d-glycero-beta-d-manno-heptose 1,7-bisphosphate 7-phosphatase | EKG39_00010 | Not Available | - | 919 - 1494 | 21211.4 |
| m24 family metallopeptidase | EKG39_00015 | Not Available | + | 1781 - 3094 | 48777.1 |
| hamp domain-containing histidine kinase | EKG39_00020 | Not Available | - | 3241 - 4608 | 50871.4 |
| duf3369 domain-containing protein | EKG39_00025 | Not Available | - | 4618 - 6150 | 57196.4 |
| amino acid permease | EKG39_00030 | Not Available | + | 6502 - 7740 | 44545.3 |
| n-acetyltransferase | EKG39_00035 | Not Available | - | 7818 - 8141 | 12699.3 |
| nuclear transport factor 2 family protein | EKG39_00040 | Not Available | - | 8131 - 8490 | 13308.7 |
| choline/carnitine o-acyltransferase | EKG39_00045 | Not Available | - | 8610 - 10352 | 65608.1 |
| bcct family transporter | EKG39_00050 | Not Available | + | 11309 - 12526 | 46060.9 |
| marr family transcriptional regulator | EKG39_00055 | Not Available | + | 12771 - 13253 | 18098.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
