Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella atlantica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 5 |
| Temperature range | psychrophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella atlantica strain HAW-EB5
Accession NumberRXNV00000000.1
Gene Summary
Adenine Count
1494847 bp
Thymine Count
1426199 bp
Guanine Count
1189223 bp
Cytosine Count
1282213 bp
Genome Length
5394979 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
123 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette domain-containing protein | EKG39_01245 | Not Available | + | 306885 - 307898 | 37903.1 |
| atp-binding cassette domain-containing protein | EKG39_01250 | Not Available | + | 307873 - 308658 | 29860.5 |
| trans-2-enoyl-coa reductase family protein | EKG39_01255 | Not Available | + | 308784 - 309986 | 43973.1 |
| transporter | EKG39_01265 | Not Available | + | 310405 - 310614 | 7127.68 |
| peptidylprolyl isomerase | EKG39_01270 | Not Available | - | 310893 - 312758 | 67776.6 |
| hu family dna-binding protein | EKG39_01275 | Not Available | - | 312967 - 313239 | 9402.28 |
| endopeptidase la | EKG39_01280 | Not Available | - | 313514 - 315859 | 87065.5 |
| atp-dependent protease atp-binding subunit clpx | EKG39_01285 | Not Available | - | 316010 - 317287 | 46339.6 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | EKG39_01290 | Not Available | - | 317371 - 317982 | 22126.7 |
| trigger factor | EKG39_01295 | Not Available | - | 318073 - 319377 | 47959.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
