Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella atlantica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 5 |
| Temperature range | psychrophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella atlantica strain HAW-EB5
Accession NumberRXNV00000000.1
Gene Summary
Adenine Count
1494847 bp
Thymine Count
1426199 bp
Guanine Count
1189223 bp
Cytosine Count
1282213 bp
Genome Length
5394979 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
123 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | EKG39_01195 | Not Available | - | 296280 - 297458 | 42167.5 |
| tigr01620 family protein | EKG39_01200 | Not Available | - | 297899 - 299008 | 41091.8 |
| ycjx family protein | EKG39_01205 | Not Available | - | 299155 - 300609 | 54090.0 |
| envelope stress response membrane protein pspc | EKG39_01210 | Not Available | - | 300659 - 301054 | 14748.1 |
| envelope stress response membrane protein pspb | EKG39_01215 | Not Available | - | 301047 - 301280 | 9059.98 |
| phage shock protein pspa | EKG39_01220 | Not Available | - | 301301 - 301984 | 25740.9 |
| phage shock protein operon transcriptional activator | EKG39_01225 | Not Available | + | 302162 - 303229 | 39794.6 |
| abc transporter substrate-binding protein | EKG39_01230 | Not Available | + | 303316 - 304959 | 61542.6 |
| abc transporter permease subunit | EKG39_01235 | Not Available | + | 304959 - 305990 | 37481.5 |
| abc transporter permease subunit | EKG39_01240 | Not Available | + | 305977 - 306867 | 31734.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
