Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella atlantica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 5 |
| Temperature range | psychrophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella atlantica strain HAW-EB5
Accession NumberRXNV00000000.1
Gene Summary
Adenine Count
1494847 bp
Thymine Count
1426199 bp
Guanine Count
1189223 bp
Cytosine Count
1282213 bp
Genome Length
5394979 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
123 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| formate transporter foca | EKG39_00390 | Not Available | - | 96819 - 98294 | 53692.0 |
| duf3360 family protein | EKG39_00395 | Not Available | + | 99228 - 100760 | 54992.2 |
| formate c-acetyltransferase | EKG39_00400 | Not Available | + | 101366 - 103648 | 84557.5 |
| pyruvate formate lyase 1-activating protein | EKG39_00405 | Not Available | + | 103747 - 104487 | 28004.6 |
| duf412 domain-containing protein | EKG39_00410 | Not Available | - | 104533 - 104976 | 17099.4 |
| acetate kinase | EKG39_00415 | Not Available | + | 105171 - 106370 | 43182.7 |
| phosphate acetyltransferase | EKG39_00420 | Not Available | + | 106464 - 108605 | 77488.0 |
| hypothetical protein | EKG39_00425 | Not Available | + | 109014 - 109445 | 16450.9 |
| hypothetical protein | EKG39_00435 | Not Available | + | 110028 - 110252 | 8719.49 |
| sam-dependent methyltransferase | EKG39_00445 | Not Available | - | 110681 - 111589 | 33953.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
