Shewanella canadensis strain HAW-EB2

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Shewanellaceae

Genus

Shewanella

Description

Shewanella canadensis strain HAW-EB2 is a Gram-negative, aerobic bacterium characterized by its rod shape and the presence of flagella, which facilitate motility. This strain thrives at an optimal temperature of 5 degrees Celsius, classifying it as psychrophilic, meaning it is well-suited for cold environments. The genetic makeup of S. canadensis HAW-EB2 is notable for having a single replicon, indicating a relatively straightforward genomic organization. Additionally, this strain does not form spores, which may reflect its ecological niche and strategies for survival in its natural habitat. The accession number for Shewanella canadensis strain HAW-EB2 is RXNU00000000.1, providing a reference for researchers seeking to access its genomic data. In terms of ecological insights, the psychrophilic nature of Shewanella canadensis strain HAW-EB2 suggests its potential role in biogeochemical cycling in cold marine environments. This adaptability to low temperatures may allow it to participate in processes such as the degradation of organic matter and the reduction of metals in cold ecosystems, contributing to the overall functioning and health of these habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyShewanellaceae
GenusShewanella
SpeciesShewanella canadensis
Strainstrain HAW-EB2

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Shewanella canadensis strain HAW-EB2
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature5
Temperature rangepsychrophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shewanella canadensis strain HAW-EB2


Gene Summary

Adenine Count

1526527 bp

Thymine Count

1553032 bp

Guanine Count

1320650 bp

Cytosine Count

1277237 bp

Genome Length

5680632 bp

Protein-coding Genes

4648 genes

Non-Coding Genes

195 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
eal domain-containing proteinEKG38_18520Not AvailablePositive4307160 - 4310222116230.0
dead/deah box helicaseEKG38_18525Not AvailablePositive4310275 - 431156447325.1
endonuclease/exonuclease/phosphatase family proteinEKG38_18530Not AvailableNegative4311646 - 431303751333.9
gtp-binding proteinEKG38_18535Not AvailablePositive4313350 - 431440538746.9
mate family efflux transporterEKG38_18540Not AvailablePositive4314458 - 431580449348.6
tonb family proteinEKG38_18545Not AvailablePositive4316015 - 431709440417.5
nad(+) kinaseEKG38_18550Not AvailableNegative4317165 - 431804331854.5
nucleotide exchange factor grpeEKG38_18555Not AvailablePositive4318137 - 431876622839.0
1-deoxy-d-xylulose-5-phosphate synthaseEKG38_18560Not AvailableNegative4318886 - 432075168019.0
(2e,6e)-farnesyl diphosphate synthaseEKG38_18565Not AvailableNegative4320772 - 432165331487.0

Displaying genes 3711 – 3720 of 4844 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.