Mycolicibacterium sp.

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Mycobacteriaceae

Genus

Mycolicibacterium

Description

Mycolicibacterium sp. is a rod-shaped bacterium that exhibits the presence of flagella, enabling motility. This genus is characterized by having a single replicon, which is indicative of its genomic organization. Mycolicibacterium sp. has been identified in association with various host plants, including Solanum tuberosum (potato), Zingiber officinale (ginger), and Coffea canephora (coffee). The accession number RXJU00000000.1 provides a reference for genomic data related to this species, facilitating further research into its genetics and potential applications. The interactions of Mycolicibacterium sp. with these host plants suggest the possibility of ecological relationships, such as symbiosis or pathogenicity, though specific interactions are not detailed in the provided data. Understanding the role of Mycolicibacterium sp. in agricultural contexts could yield insights into plant health and disease management, particularly with respect to its relationships with economically significant crops. The presence of flagella may also imply a capacity for movement toward favorable environments or away from adverse conditions, which could play a role in its interactions with host plants. Overall, Mycolicibacterium sp. represents a significant microbial player within its ecological niche, warranting further investigation into its biological functions and impacts on its associated hosts.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyMycobacteriaceae
GenusMycolicibacterium
SpeciesMycolicibacterium sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Solanum tuberosum, Zingiber officinale, Coffea canephora
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Mycolicibacterium sp. isolate AWTP1-23

Gene Summary

Adenine Count

1059279 bp

Thymine Count

1064000 bp

Guanine Count

2138687 bp

Cytosine Count

2143630 bp

Genome Length

6416132 bp

Protein-coding Genes

6076 genes

Non-Coding Genes

94 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinEKK51_04440Not AvailablePositive920464 - 92078412554.0
crossover junction endodeoxyribonuclease ruvcEKK51_04445Not AvailablePositive920861 - 92141819683.9
holliday junction branch migration protein ruvaEKK51_04450Not AvailablePositive921415 - 92200220073.3
holliday junction branch migration dna helicase ruvbEKK51_04455Not AvailablePositive921999 - 92305737461.0
duf1304 domain-containing proteinEKK51_04460Not AvailablePositive923063 - 92344913031.4
lytic transglycosylase domain-containing proteinEKK51_04465Not AvailablePositive923482 - 92421626005.3
ggdef domain-containing proteinEKK51_04470Not AvailableNegative924177 - 92524738196.9
preprotein translocase subunit yajcEKK51_04475Not AvailablePositive925522 - 92584511759.1
protein translocase subunit secdEKK51_04480Not AvailablePositive925911 - 92777364071.4
protein translocase subunit secfEKK51_04485Not AvailablePositive927781 - 92903144614.7

Displaying genes 891 – 900 of 6172 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.