Pseudonocardiaceae bacterium

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Description

The Pseudonocardiaceae bacterium is characterized by having a single replicon, indicating that its genetic material is organized in one circular chromosome. This trait is significant for its replication and gene expression processes. The bacterium is cataloged under the accession number RXJL00000000.1, which provides a reference for researchers seeking genomic information or related studies. Pseudonocardiaceae is a family known for its role in the production of bioactive secondary metabolites, including antibiotics and antifungals. This trait highlights the ecological importance of this bacterium in its natural environment, where it may contribute to the competition against other microorganisms through the production of these compounds. The presence of a single replicon simplifies the genetic architecture of the Pseudonocardiaceae bacterium, potentially streamlining its metabolic processes and responses to environmental changes. This can influence its adaptability and survival in various ecological niches, where it may engage in interactions with other microbial communities. In summary, the Pseudonocardiaceae bacterium's genomic structure, as indicated by its single replicon, offers insights into its biological functions and ecological roles, particularly in the context of its ability to produce bioactive compounds that can impact microbial diversity and interactions in its habitat.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Pseudonocardiaceae bacterium isolate AWTP1-14

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinEKK42_30395Not AvailableNegative6287200 - 628828836448.8
trm112 family proteinEKK42_30400Not AvailableNegative6288293 - 62885478201.64
phosphomannomutase/phosphoglucomutaseEKK42_30405Not AvailableNegative6288718 - 629007346727.2
duf3499 domain-containing proteinEKK42_30410Not AvailableNegative6290143 - 629051112919.2
metallopeptidase family proteinEKK42_30415Not AvailablePositive6290600 - 629107917542.0
whib family transcriptional regulatorEKK42_30420Not AvailableNegative6292011 - 629233711934.0
site-2 protease family proteinEKK42_30425Not AvailablePositive6292495 - 629324726429.0
nudix domain-containing proteinEKK42_30430Not AvailableNegative6293220 - 629377720056.5
coenzyme f420-0:l-glutamate ligaseEKK42_30435Not AvailableNegative6293771 - 629512347458.4
2-phospho-l-lactate transferaseEKK42_30440Not AvailableNegative6295116 - 629612334775.6

Displaying genes 5871 – 5880 of 6906 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.