Pseudonocardiaceae bacterium

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Description

The Pseudonocardiaceae bacterium is characterized by having a single replicon, indicating that its genetic material is organized in one circular chromosome. This trait is significant for its replication and gene expression processes. The bacterium is cataloged under the accession number RXJL00000000.1, which provides a reference for researchers seeking genomic information or related studies. Pseudonocardiaceae is a family known for its role in the production of bioactive secondary metabolites, including antibiotics and antifungals. This trait highlights the ecological importance of this bacterium in its natural environment, where it may contribute to the competition against other microorganisms through the production of these compounds. The presence of a single replicon simplifies the genetic architecture of the Pseudonocardiaceae bacterium, potentially streamlining its metabolic processes and responses to environmental changes. This can influence its adaptability and survival in various ecological niches, where it may engage in interactions with other microbial communities. In summary, the Pseudonocardiaceae bacterium's genomic structure, as indicated by its single replicon, offers insights into its biological functions and ecological roles, particularly in the context of its ability to produce bioactive compounds that can impact microbial diversity and interactions in its habitat.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Pseudonocardiaceae bacterium isolate AWTP1-14

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rieske (2fe-2s) proteinEKK42_23295Not AvailableNegative4789450 - 478993215122.5
hypothetical proteinEKK42_23300Not AvailableNegative4790708 - 47909116054.18
pyridoxamine 5-phosphate oxidaseEKK42_23305Not AvailablePositive4791092 - 479157717298.0
dual-specificity rna methyltransferase rlmnEKK42_23310Not AvailablePositive4791605 - 479271139549.6
atp-dependent dna ligaseEKK42_23315Not AvailableNegative4792716 - 479378640730.5
g/u mismatch-specific dna glycosylaseEKK42_23320Not AvailablePositive4793840 - 479439419830.6
atp-dependent dna ligaseEKK42_23325Not AvailableNegative4794401 - 479537236663.8
duf2631 domain-containing proteinEKK42_23330Not AvailableNegative4795389 - 47956499305.54
1-deoxy-d-xylulose-5-phosphate reductoisomeraseEKK42_23335Not AvailablePositive4795871 - 479704939687.1
rip metalloproteaseEKK42_23340Not AvailablePositive4797065 - 479826142536.2

Displaying genes 4491 – 4500 of 6906 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.