Pseudonocardiaceae bacterium

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Description

The Pseudonocardiaceae bacterium is characterized by having a single replicon, indicating that its genetic material is organized in one circular chromosome. This trait is significant for its replication and gene expression processes. The bacterium is cataloged under the accession number RXJL00000000.1, which provides a reference for researchers seeking genomic information or related studies. Pseudonocardiaceae is a family known for its role in the production of bioactive secondary metabolites, including antibiotics and antifungals. This trait highlights the ecological importance of this bacterium in its natural environment, where it may contribute to the competition against other microorganisms through the production of these compounds. The presence of a single replicon simplifies the genetic architecture of the Pseudonocardiaceae bacterium, potentially streamlining its metabolic processes and responses to environmental changes. This can influence its adaptability and survival in various ecological niches, where it may engage in interactions with other microbial communities. In summary, the Pseudonocardiaceae bacterium's genomic structure, as indicated by its single replicon, offers insights into its biological functions and ecological roles, particularly in the context of its ability to produce bioactive compounds that can impact microbial diversity and interactions in its habitat.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Pseudonocardiaceae bacterium isolate AWTP1-14

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alpha-ketoacid dehydrogenase subunit betaEKK42_16200Not AvailableNegative3331535 - 333251233694.6
thiamine pyrophosphate-dependent dehydrogenase e1 component subunit alphaEKK42_16205Not AvailableNegative3332509 - 333347134470.9
alpha-ketoacid dehydrogenase subunit betaEKK42_16210Not AvailableNegative3333468 - 333445434389.4
thiamine pyrophosphate-dependent dehydrogenase e1 component subunit alphaEKK42_16215Not AvailableNegative3334486 - 333551435687.2
sugar phosphate isomerase/epimeraseEKK42_16220Not AvailableNegative3335511 - 333639231399.1
2-oxo acid dehydrogenase subunit e2EKK42_16225Not AvailableNegative3336389 - 333769043221.0
helix-turn-helix domain-containing proteinEKK42_16230Not AvailableNegative3337930 - 333893436574.5
alcohol dehydrogenaseEKK42_16235Not AvailablePositive3339150 - 334020236041.5
d-2-hydroxyacid dehydrogenase family proteinEKK42_16240Not AvailableNegative3340208 - 334116133189.0
iclr family transcriptional regulatorEKK42_16245Not AvailableNegative3341895 - 334270429233.0

Displaying genes 3151 – 3160 of 6906 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.