Pseudonocardiaceae bacterium

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Description

The Pseudonocardiaceae bacterium is characterized by having a single replicon, indicating that its genetic material is organized in one circular chromosome. This trait is significant for its replication and gene expression processes. The bacterium is cataloged under the accession number RXJL00000000.1, which provides a reference for researchers seeking genomic information or related studies. Pseudonocardiaceae is a family known for its role in the production of bioactive secondary metabolites, including antibiotics and antifungals. This trait highlights the ecological importance of this bacterium in its natural environment, where it may contribute to the competition against other microorganisms through the production of these compounds. The presence of a single replicon simplifies the genetic architecture of the Pseudonocardiaceae bacterium, potentially streamlining its metabolic processes and responses to environmental changes. This can influence its adaptability and survival in various ecological niches, where it may engage in interactions with other microbial communities. In summary, the Pseudonocardiaceae bacterium's genomic structure, as indicated by its single replicon, offers insights into its biological functions and ecological roles, particularly in the context of its ability to produce bioactive compounds that can impact microbial diversity and interactions in its habitat.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Pseudonocardiaceae bacterium isolate AWTP1-14

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
elongation factor pEKK42_15210Not AvailableNegative3123976 - 312453920251.0
aminopeptidase p family proteinEKK42_15215Not AvailableNegative3124741 - 312582937298.4
3-dehydroquinate synthaseEKK42_15220Not AvailableNegative3125834 - 312693738536.6
shikimate kinaseEKK42_15225Not AvailableNegative3126978 - 312759821413.6
chorismate synthaseEKK42_15230Not AvailableNegative3127595 - 312879141573.8
prepilin peptidaseEKK42_15235Not AvailableNegative3128847 - 312973128508.5
ppox class f420-dependent oxidoreductaseEKK42_15240Not AvailablePositive3129717 - 313028320027.7
spermine synthaseEKK42_15245Not AvailableNegative3130262 - 313113430116.9
endolytic transglycosylase mltgEKK42_15250Not AvailableNegative3131183 - 313228337998.2
holliday junction resolvase ruvxEKK42_15255Not AvailableNegative3133188 - 313363715760.9

Displaying genes 2961 – 2970 of 6906 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.