Pseudonocardiaceae bacterium

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Description

The Pseudonocardiaceae bacterium is characterized by having a single replicon, indicating that its genetic material is organized in one circular chromosome. This trait is significant for its replication and gene expression processes. The bacterium is cataloged under the accession number RXJL00000000.1, which provides a reference for researchers seeking genomic information or related studies. Pseudonocardiaceae is a family known for its role in the production of bioactive secondary metabolites, including antibiotics and antifungals. This trait highlights the ecological importance of this bacterium in its natural environment, where it may contribute to the competition against other microorganisms through the production of these compounds. The presence of a single replicon simplifies the genetic architecture of the Pseudonocardiaceae bacterium, potentially streamlining its metabolic processes and responses to environmental changes. This can influence its adaptability and survival in various ecological niches, where it may engage in interactions with other microbial communities. In summary, the Pseudonocardiaceae bacterium's genomic structure, as indicated by its single replicon, offers insights into its biological functions and ecological roles, particularly in the context of its ability to produce bioactive compounds that can impact microbial diversity and interactions in its habitat.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Pseudonocardiaceae bacterium isolate AWTP1-14

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
m20 family peptidaseEKK42_05590Not AvailablePositive1111704 - 111287941156.7
amidaseEKK42_05595Not AvailablePositive1112876 - 111426748816.9
sigma-70 family rna polymerase sigma factorEKK42_05600Not AvailableNegative1114415 - 111481314913.6
duf2127 domain-containing proteinEKK42_05605Not AvailableNegative1115030 - 111592332056.0
sdr family nad(p)-dependent oxidoreductaseEKK42_05610Not AvailableNegative1116049 - 111675624118.6
formamidopyrimidine-dna glycosylaseEKK42_05620Not AvailableNegative1118113 - 111893429355.2
duf1272 domain-containing proteinEKK42_05625Not AvailablePositive1119000 - 11192518908.46
phage tail proteinEKK42_05630Not AvailablePositive1119373 - 111983717097.2
llm class flavin-dependent oxidoreductaseEKK42_05635Not AvailablePositive1120008 - 112087730592.7
nad(p)-dependent oxidoreductaseEKK42_05640Not AvailableNegative1120883 - 112174029857.3

Displaying genes 1101 – 1110 of 6906 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.