Variovorax guangxiensis strain DSM 27352 42

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Variovorax

Description

Variovorax guangxiensis strain DSM 27352 is a rod-shaped bacterium characterized by its single replicon. The strain is cataloged under the accession RXFT00000000.1, which contributes to its identification and classification within microbial databases. As a member of the Variovorax genus, this strain is likely involved in various ecological processes, particularly in the degradation of complex organic compounds. Members of the Variovorax genus are often noted for their versatility in utilizing diverse carbon sources, which can play a significant role in bioremediation and nutrient cycling in different environments. The presence of a single replicon suggests a streamlined genomic organization, which may enhance its adaptability and efficiency in various ecological niches. This trait can be indicative of the organism's evolutionary strategies in adapting to its environment, although specific ecological interactions and pathways for this strain are not provided. In summary, Variovorax guangxiensis strain DSM 27352 exhibits key traits such as its rod shape and single replicon structure, contributing to its functional role in environmental processes. Understanding the characteristics of this strain can provide insights into its potential applications in bioremediation and environmental sustainability efforts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusVariovorax
SpeciesVariovorax guangxiensis
Strainstrain DSM 27352 42

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Variovorax guangxiensis strain DSM 27352 42, whole genome shotgun

Gene Summary

Adenine Count

1167077 bp

Thymine Count

1172628 bp

Guanine Count

2433630 bp

Cytosine Count

2411990 bp

Genome Length

7188392 bp

Protein-coding Genes

6475 genes

Non-Coding Genes

128 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
acyltransferaseEJP67_26190Not AvailablePositive5662466 - 566443371725.4
acyltransferaseEJP67_26195Not AvailablePositive5664485 - 566645571515.3
dna gyrase inhibitor yacgEJP67_26200Not AvailableNegative5666474 - 56666867566.85
cell division protein zapdEJP67_26205Not AvailableNegative5666683 - 566743828529.4
hypothetical proteinEJP67_26210Not AvailableNegative5667469 - 566850338865.5
mboat family proteinEJP67_26215Not AvailableNegative5668508 - 567000156227.7
dephospho-coa kinaseEJP67_26220Not AvailableNegative5670071 - 567067621157.6
prepilin peptidaseEJP67_26225Not AvailableNegative5670690 - 567165534591.8
type ii secretion system f family proteinEJP67_26230Not AvailableNegative5671655 - 567288444672.0
type iv-a pilus assembly atpase pilbEJP67_26235Not AvailableNegative5672911 - 567464462515.3

Displaying genes 5161 – 5170 of 6603 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.