Variovorax guangxiensis strain DSM 27352 42

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Variovorax

Description

Variovorax guangxiensis strain DSM 27352 is a rod-shaped bacterium characterized by its single replicon. The strain is cataloged under the accession RXFT00000000.1, which contributes to its identification and classification within microbial databases. As a member of the Variovorax genus, this strain is likely involved in various ecological processes, particularly in the degradation of complex organic compounds. Members of the Variovorax genus are often noted for their versatility in utilizing diverse carbon sources, which can play a significant role in bioremediation and nutrient cycling in different environments. The presence of a single replicon suggests a streamlined genomic organization, which may enhance its adaptability and efficiency in various ecological niches. This trait can be indicative of the organism's evolutionary strategies in adapting to its environment, although specific ecological interactions and pathways for this strain are not provided. In summary, Variovorax guangxiensis strain DSM 27352 exhibits key traits such as its rod shape and single replicon structure, contributing to its functional role in environmental processes. Understanding the characteristics of this strain can provide insights into its potential applications in bioremediation and environmental sustainability efforts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusVariovorax
SpeciesVariovorax guangxiensis
Strainstrain DSM 27352 42

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Variovorax guangxiensis strain DSM 27352 42, whole genome shotgun

Gene Summary

Adenine Count

1167077 bp

Thymine Count

1172628 bp

Guanine Count

2433630 bp

Cytosine Count

2411990 bp

Genome Length

7188392 bp

Protein-coding Genes

6475 genes

Non-Coding Genes

128 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cbs domain-containing proteinEJP67_25790Not AvailablePositive5568135 - 556857215639.2
fcd domain-containing proteinEJP67_25795Not AvailableNegative5568591 - 556928025413.7
dihydroxy-acid dehydrataseEJP67_25800Not AvailablePositive5569395 - 557112562852.9
ribonuclease activity regulator rraaEJP67_25805Not AvailablePositive5571169 - 557187925641.8
tripartite tricarboxylate transporter substrate binding proteinEJP67_25810Not AvailablePositive5571916 - 557289634442.0
smp-30/gluconolactonase/lre family proteinEJP67_25815Not AvailablePositive5572937 - 557404340406.5
hypothetical proteinEJP67_25820Not AvailableNegative5574094 - 557496331826.1
type vi secretion system protein tssaEJP67_25825Not AvailableNegative5575097 - 557633845278.8
type vi secretion protein icmfEJP67_25830Not AvailableNegative5576323 - 5580387149324.0
dotu family type iv/vi secretion system proteinEJP67_25835Not AvailableNegative5580428 - 558118928974.6

Displaying genes 5081 – 5090 of 6603 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.