Variovorax guangxiensis strain DSM 27352 42

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Variovorax

Description

Variovorax guangxiensis strain DSM 27352 is a rod-shaped bacterium characterized by its single replicon. The strain is cataloged under the accession RXFT00000000.1, which contributes to its identification and classification within microbial databases. As a member of the Variovorax genus, this strain is likely involved in various ecological processes, particularly in the degradation of complex organic compounds. Members of the Variovorax genus are often noted for their versatility in utilizing diverse carbon sources, which can play a significant role in bioremediation and nutrient cycling in different environments. The presence of a single replicon suggests a streamlined genomic organization, which may enhance its adaptability and efficiency in various ecological niches. This trait can be indicative of the organism's evolutionary strategies in adapting to its environment, although specific ecological interactions and pathways for this strain are not provided. In summary, Variovorax guangxiensis strain DSM 27352 exhibits key traits such as its rod shape and single replicon structure, contributing to its functional role in environmental processes. Understanding the characteristics of this strain can provide insights into its potential applications in bioremediation and environmental sustainability efforts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusVariovorax
SpeciesVariovorax guangxiensis
Strainstrain DSM 27352 42

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Variovorax guangxiensis strain DSM 27352 42, whole genome shotgun

Gene Summary

Adenine Count

1167077 bp

Thymine Count

1172628 bp

Guanine Count

2433630 bp

Cytosine Count

2411990 bp

Genome Length

7188392 bp

Protein-coding Genes

6475 genes

Non-Coding Genes

128 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trypsin-like serine proteaseEJP67_18080Not AvailableNegative3927101 - 392811134771.6
tatd family deoxyribonucleaseEJP67_18085Not AvailablePositive3928209 - 392906930973.2
hypothetical proteinEJP67_18090Not AvailablePositive3929202 - 392962114286.8
dna-deoxyinosine glycosylaseEJP67_18095Not AvailablePositive3929723 - 393025619040.8
spermidine synthaseEJP67_18100Not AvailablePositive3930269 - 393104529011.8
type ii/iv secretion system proteinEJP67_18105Not AvailablePositive3931062 - 393285866162.3
tripartite tricarboxylate transporter tctb family proteinEJP67_18110Not AvailablePositive3932995 - 393348317178.8
tripartite tricarboxylate transporter permeaseEJP67_18115Not AvailablePositive3933503 - 393501452834.1
lysr family transcriptional regulatorEJP67_18120Not AvailableNegative3935208 - 393613433390.9
tripartite tricarboxylate transporter substrate binding proteinEJP67_18125Not AvailablePositive3936234 - 393720534072.4

Displaying genes 3631 – 3640 of 6603 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.