Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. 679 |
| Strain | 48 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. 679 48, whole genome shotgun sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system tip protein vgrg | EJO71_24220 | Not Available | Positive | 5101079 - 5103019 | 70354.6 |
| toxin-antitoxin system ywqk family antitoxin | EJO71_24225 | Not Available | Positive | 5103028 - 5103747 | 25895.8 |
| duf4280 domain-containing protein | EJO71_24230 | Not Available | Positive | 5103751 - 5104140 | 12915.0 |
| hypothetical protein | EJO71_24235 | Not Available | Positive | 5104160 - 5104390 | 7597.59 |
| amino acid abc transporter substrate-binding protein | EJO71_24240 | Not Available | Positive | 5104408 - 5105436 | 36423.2 |
| cation:dicarboxylase symporter family transporter | EJO71_24245 | Not Available | Positive | 5105460 - 5106734 | 44676.2 |
| aspartate/glutamate racemase family protein | EJO71_24250 | Not Available | Positive | 5106748 - 5107482 | 25092.2 |
| cation:dicarboxylase symporter family transporter | EJO71_24255 | Not Available | Positive | 5107470 - 5108936 | 50852.4 |
| hypothetical protein | EJO71_24260 | Not Available | Positive | 5108933 - 5109409 | 17055.6 |
| type vi secretion system baseplate subunit tssk | EJO71_24265 | Not Available | Positive | 5109469 - 5110809 | 48582.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
