Variovorax sp. 679 48

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Variovorax

Description

Variovorax sp. 679 48 is characterized as a rod-shaped bacterium, which is a common morphology among various members of the Variovorax genus. This species is notably defined by having a single replicon, indicating a streamlined genomic organization that may contribute to its adaptability in different environments. The accession code for Variovorax sp. 679 48 is RXFS00000000.1, which can be referenced for further genomic and taxonomic information in biological databases. The genomic data associated with this accession can facilitate research into the metabolic capabilities and ecological roles of this bacterium. In ecological terms, members of the Variovorax genus are often recognized for their ability to degrade a variety of organic compounds, suggesting that Variovorax sp. 679 48 may play a role in bioremediation processes or nutrient cycling within its habitat. The rod shape of this bacterium may also influence its motility, allowing it to navigate through diverse environments effectively. This adaptability and potential metabolic versatility underline the ecological significance of Variovorax sp. 679 48 in soil or aquatic ecosystems, where it may contribute to the breakdown of pollutants and the maintenance of microbial diversity.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusVariovorax
SpeciesVariovorax sp. 679
Strain48

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Variovorax sp. 679 48, whole genome shotgun sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nitroreductaseEJO71_13905Not AvailableNegative2997884 - 299855525108.4
long-chain-fatty-acid--coa ligaseEJO71_13910Not AvailablePositive2998678 - 300031860428.8
hypothetical proteinEJO71_13915Not AvailablePositive3000783 - 300109711603.6
hypothetical proteinEJO71_13920Not AvailableNegative3001161 - 300161916404.6
copper chaperone pcu(a)cEJO71_13925Not AvailableNegative3001932 - 300239916487.1
sco family proteinEJO71_13930Not AvailableNegative3002445 - 300310424274.2
duf2946 domain-containing proteinEJO71_13935Not AvailableNegative3003184 - 300357913417.5
Trna-metNot AvailableNot AvailablePositive3003661 - 3003737Not Available
vwa domain-containing proteinEJO71_13945Not AvailableNegative3003793 - 300529853594.5
sigma-70 family rna polymerase sigma factorEJO71_13950Not AvailablePositive3005434 - 300610524671.3

Displaying genes 2821 – 2830 of 6754 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.