Variovorax sp. 679 48

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Variovorax

Description

Variovorax sp. 679 48 is characterized as a rod-shaped bacterium, which is a common morphology among various members of the Variovorax genus. This species is notably defined by having a single replicon, indicating a streamlined genomic organization that may contribute to its adaptability in different environments. The accession code for Variovorax sp. 679 48 is RXFS00000000.1, which can be referenced for further genomic and taxonomic information in biological databases. The genomic data associated with this accession can facilitate research into the metabolic capabilities and ecological roles of this bacterium. In ecological terms, members of the Variovorax genus are often recognized for their ability to degrade a variety of organic compounds, suggesting that Variovorax sp. 679 48 may play a role in bioremediation processes or nutrient cycling within its habitat. The rod shape of this bacterium may also influence its motility, allowing it to navigate through diverse environments effectively. This adaptability and potential metabolic versatility underline the ecological significance of Variovorax sp. 679 48 in soil or aquatic ecosystems, where it may contribute to the breakdown of pollutants and the maintenance of microbial diversity.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusVariovorax
SpeciesVariovorax sp. 679
Strain48

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Variovorax sp. 679 48, whole genome shotgun sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
5-carboxymethyl-2-hydroxymuconate delta-isomeraseEJO71_10805Not AvailableNegative2318091 - 231849814938.0
extradiol ring-cleavage dioxygenaseEJO71_10810Not AvailableNegative2318515 - 231934230305.1
aromatic ring-opening dioxygenase subunit ligaEJO71_10815Not AvailableNegative2319339 - 231967412314.8
tripartite tricarboxylate transporter substrate binding proteinEJO71_10820Not AvailableNegative2319678 - 232064633733.8
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenaseEJO71_10825Not AvailableNegative2320649 - 232211552388.8
tripartite tricarboxylate transporter substrate binding proteinEJO71_10830Not AvailableNegative2322134 - 232311434225.5
2-hydroxyhepta-2,4-diene-1,7-dioate isomeraseEJO71_10835Not AvailableNegative2323186 - 232395628345.8
fumarylacetoacetate hydrolaseEJO71_10840Not AvailableNegative2323953 - 232458822420.0
homoprotocatechuate degradation operon regulator hparEJO71_10845Not AvailableNegative2324585 - 232501916269.8
marr family transcriptional regulatorEJO71_10850Not AvailableNegative2325137 - 232564618571.7

Displaying genes 2211 – 2220 of 6754 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.