Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. 679 |
| Strain | 48 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. 679 48, whole genome shotgun sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-carboxymethyl-2-hydroxymuconate delta-isomerase | EJO71_10805 | Not Available | Negative | 2318091 - 2318498 | 14938.0 |
| extradiol ring-cleavage dioxygenase | EJO71_10810 | Not Available | Negative | 2318515 - 2319342 | 30305.1 |
| aromatic ring-opening dioxygenase subunit liga | EJO71_10815 | Not Available | Negative | 2319339 - 2319674 | 12314.8 |
| tripartite tricarboxylate transporter substrate binding protein | EJO71_10820 | Not Available | Negative | 2319678 - 2320646 | 33733.8 |
| 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | EJO71_10825 | Not Available | Negative | 2320649 - 2322115 | 52388.8 |
| tripartite tricarboxylate transporter substrate binding protein | EJO71_10830 | Not Available | Negative | 2322134 - 2323114 | 34225.5 |
| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | EJO71_10835 | Not Available | Negative | 2323186 - 2323956 | 28345.8 |
| fumarylacetoacetate hydrolase | EJO71_10840 | Not Available | Negative | 2323953 - 2324588 | 22420.0 |
| homoprotocatechuate degradation operon regulator hpar | EJO71_10845 | Not Available | Negative | 2324585 - 2325019 | 16269.8 |
| marr family transcriptional regulator | EJO71_10850 | Not Available | Negative | 2325137 - 2325646 | 18571.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
