Variovorax sp. 679 48

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Variovorax

Description

Variovorax sp. 679 48 is characterized as a rod-shaped bacterium, which is a common morphology among various members of the Variovorax genus. This species is notably defined by having a single replicon, indicating a streamlined genomic organization that may contribute to its adaptability in different environments. The accession code for Variovorax sp. 679 48 is RXFS00000000.1, which can be referenced for further genomic and taxonomic information in biological databases. The genomic data associated with this accession can facilitate research into the metabolic capabilities and ecological roles of this bacterium. In ecological terms, members of the Variovorax genus are often recognized for their ability to degrade a variety of organic compounds, suggesting that Variovorax sp. 679 48 may play a role in bioremediation processes or nutrient cycling within its habitat. The rod shape of this bacterium may also influence its motility, allowing it to navigate through diverse environments effectively. This adaptability and potential metabolic versatility underline the ecological significance of Variovorax sp. 679 48 in soil or aquatic ecosystems, where it may contribute to the breakdown of pollutants and the maintenance of microbial diversity.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusVariovorax
SpeciesVariovorax sp. 679
Strain48

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Variovorax sp. 679 48, whole genome shotgun sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type vi secretion system baseplate subunit tsskEJO71_10555Not AvailablePositive2255280 - 225665950953.3
dotu family type vi secretion system proteinEJO71_10560Not AvailablePositive2256668 - 225805649776.8
type vi secretion system membrane subunit tssmEJO71_10565Not AvailablePositive2258056 - 2261718135585.0
type vi secretion system-associated protein tagfEJO71_10570Not AvailablePositive2261849 - 226256225963.6
serine/threonine protein kinaseEJO71_10575Not AvailablePositive2262612 - 226466672183.2
hypothetical proteinEJO71_10580Not AvailablePositive2264831 - 226729388182.2
phospholipaseEJO71_10585Not AvailableNegative2267445 - 226919063956.5
atp-binding proteinEJO71_10590Not AvailableNegative2269334 - 227087854409.2
hypothetical proteinEJO71_10595Not AvailablePositive2271093 - 227197130663.9
p-ii family nitrogen regulatorEJO71_10600Not AvailablePositive2272039 - 227237712289.9

Displaying genes 2161 – 2170 of 6754 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.