Variovorax sp. 679 48

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Variovorax

Description

Variovorax sp. 679 48 is characterized as a rod-shaped bacterium, which is a common morphology among various members of the Variovorax genus. This species is notably defined by having a single replicon, indicating a streamlined genomic organization that may contribute to its adaptability in different environments. The accession code for Variovorax sp. 679 48 is RXFS00000000.1, which can be referenced for further genomic and taxonomic information in biological databases. The genomic data associated with this accession can facilitate research into the metabolic capabilities and ecological roles of this bacterium. In ecological terms, members of the Variovorax genus are often recognized for their ability to degrade a variety of organic compounds, suggesting that Variovorax sp. 679 48 may play a role in bioremediation processes or nutrient cycling within its habitat. The rod shape of this bacterium may also influence its motility, allowing it to navigate through diverse environments effectively. This adaptability and potential metabolic versatility underline the ecological significance of Variovorax sp. 679 48 in soil or aquatic ecosystems, where it may contribute to the breakdown of pollutants and the maintenance of microbial diversity.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusVariovorax
SpeciesVariovorax sp. 679
Strain48

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Variovorax sp. 679 48, whole genome shotgun sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
poly-beta-1,6 n-acetyl-d-glucosamine export porin pgaaEJO71_10145Not AvailablePositive2157681 - 216035096501.8
poly-beta-1,6-n-acetyl-d-glucosamine n-deacetylase pgabEJO71_10150Not AvailablePositive2160350 - 216243177426.0
poly-beta-1,6 n-acetyl-d-glucosamine synthaseEJO71_10155Not AvailablePositive2162428 - 216370548742.1
poly-beta-1,6-n-acetyl-d-glucosamine biosynthesis protein pgadEJO71_10160Not AvailablePositive2163695 - 216431823370.1
sdr family oxidoreductaseEJO71_10165Not AvailablePositive2164356 - 216515327440.2
phosphomethylpyrimidine synthase thicEJO71_10175Not AvailableNegative2165426 - 216730969462.6
hypothetical proteinEJO71_10180Not AvailableNegative2167547 - 216796615737.4
response regulatorEJO71_10185Not AvailableNegative2168023 - 216984665780.7
luxr family transcriptional regulatorEJO71_10190Not AvailablePositive2169981 - 217073928649.2
indoleacetamide hydrolaseEJO71_10195Not AvailableNegative2170754 - 217223850458.1

Displaying genes 2081 – 2090 of 6754 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.