Escherichia coli strain PNUSAE018855

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain PNUSAE018855 is a Gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic metabolism, allowing it to thrive in diverse environments, including both aerobic and anaerobic conditions. This strain typically exists in pairs or singles and possesses flagella, enabling mobility. The optimal growth temperature for E. coli PNUSAE018855 is 37°C, classifying it as mesophilic, with a temperature range that supports its growth in various host-associated habitats. This strain is biotically associated with a wide array of hosts, including Homo sapiens (humans), Gallus gallus (chickens), Bos taurus (cattle), and several other mammals, birds, and even plants like Solanum lycopersicum (tomato) and Brassica oleracea var. italica (broccoli). Such a diverse host range indicates its adaptability and potential ecological significance. E. coli PNUSAE018855 is notable for its pathogenicity in humans, being linked to numerous health effects including urinary tract infections (UTIs), gastrointestinal infections, and severe conditions such as neonatal meningitis and hemolytic uremic syndrome (HUS). The strain's ability to cause a wide range of illnesses underscores its importance in clinical microbiology and public health. Given its role in both free-living and host-associated contexts, E. coli PNUSAE018855 exemplifies the complex interactions between pathogens and their hosts, highlighting the necessity for continuous monitoring and research to understand its impact on health and disease dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain PNUSAE018855

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain PNUSAE018855
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain PNUSAE018855

Gene Summary

Adenine Count

1262343 bp

Thymine Count

1247779 bp

Guanine Count

1277540 bp

Cytosine Count

1294110 bp

Genome Length

5094894 bp

Protein-coding Genes

4632 genes

Non-Coding Genes

367 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinD7Y10_RS10840Not AvailablePositive2309841 - 23100959431.45
Host nuclease inhibitor proteinD7Y10_RS10845Not AvailablePositive2310097 - 231037810574.9
hypothetical proteinD7Y10_RS10850Not AvailablePositive2310375 - 23106479878.98
hypothetical proteinD7Y10_RS10855Not AvailablePositive2310652 - 231094510854.8
Host nuclease inhibitor proteinD7Y10_RS10860Not AvailablePositive2310957 - 231148719639.6
Hypothetical proteinD7Y10_RS10865Not AvailablePositive2311633 - 231216619687.9
Hypothetical proteinD7Y10_RS10870Not AvailablePositive2312166 - 231268119760.7
Gp103D7Y10_RS10875Not AvailablePositive2312685 - 231323621025.5
hypothetical proteinD7Y10_RS10880Not AvailablePositive2313233 - 231356512090.2
Hypothetical proteinD7Y10_RS10885Not AvailablePositive2313703 - 231399011096.6

Displaying genes 51 – 60 of 4999 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total