Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PNUSAE018855 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262343 bp
Thymine Count
1247779 bp
Guanine Count
1277540 bp
Cytosine Count
1294110 bp
Genome Length
5094894 bp
Protein-coding Genes
4632 genes
Non-Coding Genes
367 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrate reductase subunit beta | D7Y10_RS04605 | Not Available | Negative | 987257 - 988795 | 58083.6 |
| nitrate reductase subunit alpha | D7Y10_RS04610 | Not Available | Negative | 988792 - 992535 | 140627.0 |
| nitrate transporter nark | D7Y10_RS04615 | Not Available | Negative | 992928 - 994319 | 49662.2 |
| nitrate/nitrite two-component system sensor histidine kinase narx | D7Y10_RS04620 | Not Available | Positive | 994658 - 996454 | 67100.0 |
| two-component system response regulator narl | D7Y10_RS04625 | Not Available | Positive | 996447 - 997097 | 23928.3 |
| inverse autotransporter invasin ycho | D7Y10_RS04630 | Not Available | Negative | 997098 - 998492 | 52164.6 |
| dsre/f sulfur relay family protein ychn | D7Y10_RS04635 | Not Available | Positive | 998677 - 999030 | 12720.6 |
| gamma-glutamylcyclotransferase | D7Y10_RS04640 | Not Available | Negative | 999074 - 999769 | 25500.7 |
| putative cation transport regulator chab | D7Y10_RS04645 | Not Available | Negative | 999927 - 1000157 | 8975.19 |
| sodium-potassium/proton antiporter chaa | D7Y10_RS04650 | Not Available | Positive | 1000427 - 1001527 | 39166.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





