Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PNUSAE018855 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262343 bp
Thymine Count
1247779 bp
Guanine Count
1277540 bp
Cytosine Count
1294110 bp
Genome Length
5094894 bp
Protein-coding Genes
4632 genes
Non-Coding Genes
367 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional murein dd-endopeptidase/murein ld-carboxypeptidase | D7Y10_RS03975 | Not Available | Positive | 854391 - 854957 | 21041.1 |
| cyclic di-gmp phosphodiesterase | D7Y10_RS03980 | Not Available | Positive | 855138 - 856688 | 58275.2 |
| abc transporter substrate-binding protein | D7Y10_RS03985 | Not Available | Positive | 856776 - 858590 | 69772.7 |
| microcin c abc transporter permease yejb | D7Y10_RS03990 | Not Available | Positive | 858591 - 859685 | 40362.6 |
| abc transporter permease | D7Y10_RS03995 | Not Available | Positive | 859685 - 860710 | 38108.7 |
| microcin c abc transporter atp-binding protein yejf | D7Y10_RS04000 | Not Available | Positive | 860712 - 862301 | 58670.7 |
| hypothetical protein | D7Y10_RS04005 | Not Available | Negative | 862305 - 862649 | 12525.9 |
| multidrug efflux mfs transporter bcr | D7Y10_RS04010 | Not Available | Negative | 862983 - 864173 | 43369.4 |
| 16s rrna pseudouridine(516) synthase rsua | D7Y10_RS04015 | Not Available | Negative | 864201 - 864896 | 25880.8 |
| dead/deah box helicase | D7Y10_RS04020 | Not Available | Positive | 865046 - 866806 | 66476.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





