Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PNUSAE018855 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1262343 bp
Thymine Count
1247779 bp
Guanine Count
1277540 bp
Cytosine Count
1294110 bp
Genome Length
5094894 bp
Protein-coding Genes
4632 genes
Non-Coding Genes
367 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytidine deaminase | D7Y10_RS03815 | Not Available | Positive | 817418 - 818302 | 31596.7 |
| outer membrane permeability protein sana | D7Y10_RS03820 | Not Available | Positive | 818452 - 819171 | 27288.5 |
| duf2542 family protein | D7Y10_RS03825 | Not Available | Positive | 819174 - 819413 | 9264.61 |
| nad(p)-dependent oxidoreductase | D7Y10_RS03830 | Not Available | Positive | 819607 - 820845 | 44298.1 |
| nad-dependent dihydropyrimidine dehydrogenase subunit prea | D7Y10_RS03835 | Not Available | Positive | 820839 - 822074 | 45075.4 |
| galactose/methyl galactoside abc transporter permease mglc | D7Y10_RS03840 | Not Available | Negative | 822317 - 823327 | 35608.5 |
| galactose/methyl galactoside abc transporter atp-binding protein mgla | D7Y10_RS03845 | Not Available | Negative | 823343 - 824863 | 56391.8 |
| galactose/glucose abc transporter substrate-binding protein mglb | D7Y10_RS03850 | Not Available | Negative | 824924 - 825922 | 35714.5 |
| hth-type transcriptional regulator gals | D7Y10_RS03855 | Not Available | Negative | 826202 - 827242 | 37447.1 |
| duf418 family protein | D7Y10_RS03860 | Not Available | Negative | 827384 - 828541 | 43411.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





