Escherichia coli strain PNUSAE018269

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain PNUSAE018269 is a Gram-negative, rod-shaped bacterium that exhibits mobility due to the presence of flagella. This strain is classified as a facultative anaerobe, allowing it to thrive in both aerobic and anaerobic environments. It is mesophilic, with an optimal growth temperature of 37°C, and typically resides in host-associated habitats. This strain has a diverse range of biotic relationships, being free-living and associated with various hosts, including Homo sapiens, Gallus gallus, Bos taurus, and numerous other vertebrate species, as well as certain plants like Solanum lycopersicum and Brassica oleracea var. italica. The presence of such a wide host range suggests that PNUSAE018269 may play significant roles in different ecological niches, influencing both animal health and agricultural systems. E. coli PNUSAE018269 is linked to numerous health effects, particularly in humans, where it is associated with urinary tract infections (UTIs), gastrointestinal infections, and severe conditions such as neonatal meningitis and hemolytic uremic syndrome (HUS). The strain can cause significant morbidity, manifesting in symptoms ranging from diarrhea to more severe complications like renal failure and sepsis. Given its pathogenicity profile and host associations, E. coli strain PNUSAE018269 underscores the importance of monitoring this bacterium in clinical and environmental contexts. Its capacity to cause diverse illnesses in multiple hosts highlights its role in both health and disease, necessitating further research to understand its impact on public health and ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain PNUSAE018269

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain PNUSAE018269
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain PNUSAE018269

Gene Summary

Adenine Count

1356781 bp

Thymine Count

1333410 bp

Guanine Count

1338642 bp

Cytosine Count

1377361 bp

Genome Length

5415819 bp

Protein-coding Genes

4884 genes

Non-Coding Genes

383 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Hypothetical proteinD7K66_RS16735Not AvailablePositive3570795 - 357120214907.7
hypothetical proteinD7K66_RS16740Not AvailableNegative3571180 - 35714138883.8
hypothetical proteinD7K66_RS16745Not AvailableNegative3571407 - 35715746440.72
cell division inhibition protein dicbD7K66_RS16750Not AvailablePositive3571972 - 35721607100.74
duf1482 family proteinD7K66_RS16755Not AvailablePositive3572157 - 35723486806.2
EndodeoxyribonucleaseD7K66_RS16760Not AvailablePositive3572441 - 357491292785.6
excisionaseD7K66_RS16765Not AvailablePositive3574977 - 35752259211.41
IntegraseD7K66_RS16770Not AvailablePositive3575203 - 357633343170.1
AttrNot AvailableNot AvailablePositive3587867 - 3587878Not Available
Tail fiber proteinD7K66_RS18950Not AvailableNegative4012742 - 401356129582.3

Displaying genes 51 – 60 of 5272 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total