Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PNUSAE018269 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1356781 bp
Thymine Count
1333410 bp
Guanine Count
1338642 bp
Cytosine Count
1377361 bp
Genome Length
5415819 bp
Protein-coding Genes
4884 genes
Non-Coding Genes
383 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid permease | D7K66_RS13185 | Not Available | Positive | 2821399 - 2822829 | 52472.5 |
| pyruvate formate lyase 1-activating protein | D7K66_RS13195 | Not Available | Negative | 2823039 - 2823779 | 28205.9 |
| formate c-acetyltransferase | D7K66_RS13200 | Not Available | Negative | 2823971 - 2826253 | 85355.0 |
| formate transporter foca | D7K66_RS13205 | Not Available | Negative | 2826308 - 2827165 | 30992.6 |
| 30s ribosomal protein s12 methylthiotransferase accessory protein ycao | D7K66_RS13210 | Not Available | Negative | 2827571 - 2829331 | 65669.0 |
| duf421 domain-containing protein | D7K66_RS13215 | Not Available | Positive | 2829461 - 2830153 | 26273.5 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | D7K66_RS13220 | Not Available | Positive | 2830352 - 2831440 | 39856.6 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | D7K66_RS13225 | Not Available | Positive | 2831511 - 2832794 | 46098.5 |
| m48 family metallopeptidase | D7K66_RS13230 | Not Available | Positive | 2832963 - 2833727 | 26796.7 |
| (d)cmp kinase | D7K66_RS13235 | Not Available | Positive | 2833900 - 2834583 | 24747.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





