Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PNUSAE018269 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1356781 bp
Thymine Count
1333410 bp
Guanine Count
1338642 bp
Cytosine Count
1377361 bp
Genome Length
5415819 bp
Protein-coding Genes
4884 genes
Non-Coding Genes
383 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| terminase small subunit | D7K66_RS13085 | Not Available | Positive | 2794491 - 2794979 | 17947.9 |
| phage major capsid protein | D7K66_RS13090 | Not Available | Positive | 2795142 - 2796065 | 33214.2 |
| atp-dependent clp protease adapter clps | D7K66_RS13095 | Not Available | Positive | 2797044 - 2797364 | 12179.7 |
| atp-dependent clp protease atp-binding subunit clpa | D7K66_RS13100 | Not Available | Positive | 2797395 - 2799671 | 84211.9 |
| Trna-ser | Not Available | Not Available | Positive | 2800017 - 2800104 | Not Available |
| translation initiation factor if-1 | D7K66_RS13110 | Not Available | Negative | 2800358 - 2800576 | 8250.1 |
| leucyl/phenylalanyl-trna--protein transferase | D7K66_RS13115 | Not Available | Negative | 2800861 - 2801565 | 26619.0 |
| cysteine/glutathione abc transporter atp-binding protein/permease cydc | D7K66_RS13120 | Not Available | Negative | 2801607 - 2803328 | 62818.0 |
| cysteine/glutathione abc transporter permease/atp-binding protein cydd | D7K66_RS13125 | Not Available | Negative | 2803329 - 2805095 | 65090.0 |
| thioredoxin-disulfide reductase | D7K66_RS13130 | Not Available | Negative | 2805218 - 2806183 | 34625.1 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





