Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PNUSAE018269 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1356781 bp
Thymine Count
1333410 bp
Guanine Count
1338642 bp
Cytosine Count
1377361 bp
Genome Length
5415819 bp
Protein-coding Genes
4884 genes
Non-Coding Genes
383 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copc domain-containing protein yoba | D7K66_RS12025 | Not Available | Positive | 2568287 - 2568661 | 13439.0 |
| copper homeostasis membrane protein copd | D7K66_RS12030 | Not Available | Positive | 2568665 - 2569537 | 32585.4 |
| yeby family protein | D7K66_RS12035 | Not Available | Positive | 2569550 - 2569891 | 12379.2 |
| protein-serine/threonine phosphatase | D7K66_RS12040 | Not Available | Positive | 2570287 - 2570943 | 25392.4 |
| yebw family protein | D7K66_RS12045 | Not Available | Negative | 2570944 - 2571219 | 10443.4 |
| duf1480 family protein | D7K66_RS12050 | Not Available | Negative | 2571240 - 2571476 | 8753.26 |
| 16s rrna (cytosine(1407)-c(5))-methyltransferase rsmf | D7K66_RS12055 | Not Available | Negative | 2571594 - 2573033 | 53265.3 |
| lipid-binding membrane homeostasis protein yebt | D7K66_RS12060 | Not Available | Negative | 2573114 - 2575747 | 95019.1 |
| membrane integrity lipid transport subunit yebs | D7K66_RS12065 | Not Available | Negative | 2575716 - 2576999 | 48276.3 |
| gaf domain-containing protein | D7K66_RS12070 | Not Available | Positive | 2577129 - 2577626 | 18080.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





