Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PNUSAE018269 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1356781 bp
Thymine Count
1333410 bp
Guanine Count
1338642 bp
Cytosine Count
1377361 bp
Genome Length
5415819 bp
Protein-coding Genes
4884 genes
Non-Coding Genes
383 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system lee ring protein escq | D7K66_RS10920 | Not Available | Positive | 2339473 - 2340390 | 34894.7 |
| type iii secretion system lee effector esph | D7K66_RS10925 | Not Available | Positive | 2340421 - 2340927 | 19283.0 |
| type iii secretion system lee chaperone cesf | D7K66_RS10930 | Not Available | Negative | 2341125 - 2341508 | 14687.5 |
| type iii secretion system lee effector map (rho guanine exchange factor) | D7K66_RS10935 | Not Available | Positive | 2341774 - 2342385 | 22925.3 |
| type iii secretion system lee translocated intimin receptor tir | D7K66_RS10940 | Not Available | Positive | 2342809 - 2344485 | 58025.8 |
| type iii secretion system lee chaperone cest | D7K66_RS10945 | Not Available | Positive | 2344623 - 2345093 | 17681.9 |
| intimin type gamma | D7K66_RS10950 | Not Available | Positive | 2345153 - 2347957 | 101841.0 |
| type iii secretion system lee inner membrane ring protein escd | D7K66_RS10955 | Not Available | Negative | 2348221 - 2349441 | 45261.8 |
| type iii secretion system lee gatekeeper sepl | D7K66_RS10960 | Not Available | Positive | 2349584 - 2350639 | 39954.0 |
| type iii secretion system lee translocon filament protein espa | D7K66_RS10965 | Not Available | Positive | 2350698 - 2351276 | 20575.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





