Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytoskeleton protein rodz | EC382_RS03135 | Not Available | Positive | 672183 - 673196 | 36174.5 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | EC382_RS03140 | Not Available | Positive | 673223 - 674341 | 40686.1 |
| histidine--trna ligase | EC382_RS03145 | Not Available | Positive | 674452 - 675726 | 47032.2 |
| yfgm family protein | EC382_RS03150 | Not Available | Positive | 675744 - 676364 | 22177.2 |
| outer membrane protein assembly factor bamb | EC382_RS03155 | Not Available | Positive | 676375 - 677553 | 41891.6 |
| ribosome biogenesis gtpase der | EC382_RS03160 | Not Available | Positive | 677671 - 679143 | 55039.1 |
| hypothetical protein | EC382_RS03165 | Not Available | Positive | 679212 - 679427 | 7868.56 |
| exodeoxyribonuclease vii large subunit | EC382_RS03170 | Not Available | Negative | 679424 - 680794 | 51790.3 |
| imp dehydrogenase | EC382_RS03175 | Not Available | Positive | 680956 - 682422 | 52025.6 |
| glutamine-hydrolyzing gmp synthase | EC382_RS03180 | Not Available | Positive | 682491 - 684068 | 58682.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





