Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | EC382_RS02985 | Not Available | Positive | 634980 - 635768 | 28081.7 |
| lipid-a-disaccharide synthase | EC382_RS02990 | Not Available | Positive | 635768 - 636916 | 42418.0 |
| ribonuclease hii | EC382_RS02995 | Not Available | Positive | 636913 - 637509 | 21553.3 |
| dna polymerase iii subunit alpha | EC382_RS03000 | Not Available | Positive | 637546 - 641028 | 129898.0 |
| acetyl-coa carboxylase carboxyl transferase subunit alpha | EC382_RS03005 | Not Available | Positive | 641041 - 642000 | 35243.6 |
| lysine decarboxylase ldcc | EC382_RS03010 | Not Available | Positive | 642099 - 644240 | 80594.9 |
| voc family protein | EC382_RS03015 | Not Available | Positive | 644297 - 644686 | 14707.4 |
| trna lysidine(34) synthetase tils | EC382_RS03020 | Not Available | Positive | 644751 - 646049 | 48071.9 |
| rho-binding antiterminator | EC382_RS03025 | Not Available | Negative | 646098 - 646358 | 9698.45 |
| yaep family protein | EC382_RS03030 | Not Available | Negative | 646345 - 646545 | 7214.59 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





