Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial chaperone | EC382_RS02785 | Not Available | Negative | 589078 - 589803 | 26258.4 |
| fimbrial protein | EC382_RS02790 | Not Available | Negative | 589890 - 590486 | 20424.2 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | EC382_RS02795 | Not Available | Negative | 590829 - 591308 | 17761.3 |
| polynucleotide adenylyltransferase pcnb | EC382_RS02800 | Not Available | Negative | 591305 - 592723 | 54659.0 |
| trna glutamyl-q(34) synthetase gluqrs | EC382_RS02805 | Not Available | Negative | 592762 - 593688 | 34871.6 |
| rna polymerase-binding transcription factor dksa | EC382_RS02810 | Not Available | Negative | 593725 - 594180 | 17528.7 |
| dna/rna nuclease sfsa | EC382_RS02815 | Not Available | Negative | 594358 - 595062 | 26230.2 |
| rna 2',3'-cyclic phosphodiesterase | EC382_RS02820 | Not Available | Negative | 595077 - 595607 | 19903.0 |
| atp-dependent helicase hrpb | EC382_RS02825 | Not Available | Positive | 595681 - 598110 | 89048.0 |
| bifunctional glycosyl transferase/transpeptidase | EC382_RS02830 | Not Available | Positive | 598306 - 600840 | 94270.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





