Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide deacetylase family protein | EC382_RS02735 | Not Available | Positive | 578584 - 579813 | 46327.8 |
| aspartate 1-decarboxylase | EC382_RS02740 | Not Available | Negative | 579817 - 580197 | 13834.5 |
| rpn family recombination-promoting nuclease/putative transposase | EC382_RS02745 | Not Available | Positive | 580471 - 581343 | 33709.8 |
| pantoate--beta-alanine ligase | EC382_RS02750 | Not Available | Negative | 581717 - 582568 | 31597.5 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | EC382_RS02755 | Not Available | Negative | 582580 - 583374 | 28223.2 |
| fimbrial protein | EC382_RS02760 | Not Available | Negative | 583510 - 584622 | 40240.9 |
| fimbrial protein | EC382_RS02765 | Not Available | Negative | 584634 - 585224 | 21232.9 |
| fimbrial protein | EC382_RS02770 | Not Available | Negative | 585245 - 585859 | 21352.2 |
| fimbrial protein | EC382_RS02775 | Not Available | Negative | 585874 - 586422 | 18819.2 |
| outer membrane usher protein | EC382_RS02780 | Not Available | Negative | 586436 - 589036 | 94619.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





