Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampd | EC382_RS02635 | Not Available | Positive | 552360 - 552911 | 20511.1 |
| beta-lactamase regulator ampe | EC382_RS02640 | Not Available | Positive | 552908 - 553762 | 32123.9 |
| aromatic amino acid transporter arop | EC382_RS02645 | Not Available | Negative | 553805 - 555178 | 49679.1 |
| pyruvate dehydrogenase complex transcriptional repressor pdhr | EC382_RS02650 | Not Available | Positive | 555719 - 556483 | 29411.2 |
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | EC382_RS02655 | Not Available | Positive | 556644 - 559307 | 99674.1 |
| pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | EC382_RS02660 | Not Available | Positive | 559322 - 561214 | 66101.7 |
| dihydrolipoyl dehydrogenase | EC382_RS02665 | Not Available | Positive | 561422 - 562846 | 50691.4 |
| duf3300 domain-containing protein | EC382_RS02670 | Not Available | Negative | 562917 - 564764 | 69019.3 |
| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | EC382_RS02675 | Not Available | Positive | 565119 - 567716 | 93488.4 |
| yacl family protein | EC382_RS02680 | Not Available | Positive | 567891 - 568253 | 13930.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





