Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| preprotein translocase subunit seca | EC382_RS02585 | Not Available | Positive | 541906 - 544611 | 101971.0 |
| 8-oxo-dgtp diphosphatase mutt | EC382_RS02590 | Not Available | Positive | 544671 - 545060 | 14858.8 |
| dna gyrase inhibitor yacg | EC382_RS02595 | Not Available | Negative | 545276 - 545473 | 7306.49 |
| cell division protein zapd | EC382_RS02600 | Not Available | Negative | 545483 - 546226 | 28279.3 |
| dephospho-coa kinase | EC382_RS02605 | Not Available | Negative | 546226 - 546846 | 22667.0 |
| gmp reductase | EC382_RS02610 | Not Available | Positive | 547071 - 548114 | 37385.8 |
| protein transport protein hofc | EC382_RS02615 | Not Available | Negative | 548149 - 549351 | 44438.2 |
| type ii secretion system protein gspe | EC382_RS02620 | Not Available | Negative | 549341 - 550726 | 50584.3 |
| prepilin peptidase-dependent pilin | EC382_RS02625 | Not Available | Negative | 550736 - 551176 | 15604.7 |
| carboxylating nicotinate-nucleotide diphosphorylase | EC382_RS02630 | Not Available | Negative | 551379 - 552272 | 32774.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





