Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nickel abc transporter permease subunit nikc | EC382_RS02435 | Not Available | Positive | 510540 - 511373 | 30362.9 |
| nickel import atp-binding protein nikd | EC382_RS02440 | Not Available | Positive | 511373 - 512137 | 26833.2 |
| nickel import atp-binding protein nike | EC382_RS02445 | Not Available | Positive | 512134 - 512940 | 29689.4 |
| nickel-responsive transcriptional regulator nikr | EC382_RS02450 | Not Available | Positive | 512946 - 513347 | 15094.7 |
| 3-isopropylmalate dehydratase large subunit | EC382_RS02455 | Not Available | Negative | 513698 - 514493 | 28713.6 |
| 3-isopropylmalate dehydrogenase | EC382_RS02460 | Not Available | Negative | 514496 - 515587 | 39581.3 |
| 2-isopropylmalate synthase | EC382_RS02465 | Not Available | Negative | 515587 - 517158 | 57287.1 |
| leu operon leader peptide | EC382_RS02470 | Not Available | Negative | 517251 - 517337 | 3146.0 |
| transcriptional regulator leuo | EC382_RS02475 | Not Available | Positive | 517995 - 518939 | 35745.9 |
| acetolactate synthase 3 large subunit | EC382_RS02480 | Not Available | Positive | 519257 - 520981 | 62945.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





