Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1145 family protein | EC382_RS02285 | Not Available | Positive | 483982 - 484251 | 10280.4 |
| duf2500 domain-containing protein | EC382_RS02290 | Not Available | Negative | 484254 - 484613 | 13529.4 |
| lysoplasmalogenase | EC382_RS02295 | Not Available | Positive | 484754 - 485380 | 23764.8 |
| zn(ii)/cd(ii)/pb(ii) translocating p-type atpase znta | EC382_RS02300 | Not Available | Positive | 485454 - 487652 | 76742.2 |
| sulfurtransferase tusa | EC382_RS02305 | Not Available | Negative | 487754 - 487999 | 9095.09 |
| 7-cyano-7-deazaguanine/7-aminomethyl-7- deazaguanine transporter | EC382_RS02310 | Not Available | Positive | 488220 - 488885 | 25334.3 |
| phage sensitivity protein dcrb | EC382_RS02315 | Not Available | Positive | 488958 - 489515 | 19788.7 |
| mfs transporter | EC382_RS02320 | Not Available | Negative | 489519 - 490736 | 42198.3 |
| ai-2e family transporter | EC382_RS02325 | Not Available | Positive | 490868 - 491917 | 38554.8 |
| lipoprotein | EC382_RS02330 | Not Available | Positive | 492309 - 492686 | 13765.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





