Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| high-affinity branched-chain amino acid abc transporter permease livm | EC382_RS02235 | Not Available | Negative | 473191 - 474468 | 46272.2 |
| high-affinity branched-chain amino acid abc transporter permease livh | EC382_RS02240 | Not Available | Negative | 474465 - 475391 | 32984.4 |
| high-affinity branched-chain amino acid abc transporter substrate-binding protein livk | EC382_RS02245 | Not Available | Negative | 475439 - 476548 | 39380.9 |
| aspartate 1-decarboxylase autocleavage activator panm | EC382_RS02250 | Not Available | Positive | 476972 - 477355 | 14559.4 |
| branched-chain amino acid abc transporter substrate-binding protein | EC382_RS02255 | Not Available | Negative | 477555 - 478658 | 39078.5 |
| rna polymerase sigma factor rpoh | EC382_RS02260 | Not Available | Negative | 478929 - 479783 | 32470.6 |
| cell division protein ftsx | EC382_RS02265 | Not Available | Negative | 480028 - 481086 | 38574.0 |
| cell division atp-binding protein ftse | EC382_RS02270 | Not Available | Negative | 481079 - 481747 | 24440.8 |
| signal recognition particle-docking protein ftsy | EC382_RS02275 | Not Available | Negative | 481750 - 483246 | 54658.4 |
| 16s rrna (guanine(966)-n(2))-methyltransferase | EC382_RS02280 | Not Available | Positive | 483396 - 483992 | 21704.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





