Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-processing protein dpra | EC382_RS02135 | Not Available | Negative | 452038 - 453333 | 47058.5 |
| recq family atp-dependent dna helicase | EC382_RS02140 | Not Available | Negative | 453240 - 455336 | 77474.3 |
| gluconate transporter | EC382_RS02145 | Not Available | Negative | 455476 - 456816 | 46418.9 |
| gluconokinase | EC382_RS02150 | Not Available | Negative | 456820 - 457347 | 19544.4 |
| gluconate operon transcriptional repressor gntr | EC382_RS02155 | Not Available | Negative | 457486 - 458481 | 36437.3 |
| pirin family protein | EC382_RS02160 | Not Available | Negative | 458705 - 459400 | 26280.8 |
| oxidoreductase | EC382_RS02165 | Not Available | Negative | 459523 - 460560 | 38767.1 |
| n-acetyltransferase | EC382_RS02170 | Not Available | Positive | 460895 - 461383 | 18780.6 |
| duf4225 domain-containing protein | EC382_RS02175 | Not Available | Positive | 461594 - 462442 | 32245.6 |
| hypothetical protein | EC382_RS02180 | Not Available | Negative | 462455 - 462871 | 15959.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





