Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribulose-phosphate 3-epimerase | EC382_RS01885 | Not Available | Negative | 388099 - 388776 | 24555.7 |
| adenine-specific dna-methyltransferase | EC382_RS01890 | Not Available | Negative | 388794 - 389630 | 32087.2 |
| cell division protein damx | EC382_RS01895 | Not Available | Negative | 389737 - 391023 | 46134.3 |
| 3-dehydroquinate synthase | EC382_RS01900 | Not Available | Negative | 391115 - 392203 | 38883.4 |
| shikimate kinase arok | EC382_RS01905 | Not Available | Negative | 392260 - 392781 | 19539.2 |
| dna uptake porin hofq | EC382_RS01910 | Not Available | Negative | 393182 - 394420 | 44767.9 |
| dna utilization protein hofp | EC382_RS01915 | Not Available | Negative | 394332 - 394736 | 15127.1 |
| dna utilization protein hofo | EC382_RS01920 | Not Available | Negative | 394726 - 395166 | 16957.3 |
| piln domain-containing protein | EC382_RS01925 | Not Available | Negative | 395150 - 395689 | 20853.2 |
| dna utilization protein hofm | EC382_RS01930 | Not Available | Negative | 395689 - 396468 | 29064.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





