Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | EC382_RS01835 | Not Available | Negative | 378678 - 379763 | 38649.8 |
| hypothetical protein | EC382_RS01840 | Not Available | Negative | 379775 - 381079 | 46511.3 |
| duf2620 domain-containing protein | EC382_RS01845 | Not Available | Negative | 381091 - 381444 | 12479.5 |
| phosphotriesterase-related protein | EC382_RS01850 | Not Available | Negative | 381455 - 382333 | 32889.3 |
| phosphopentomutase | EC382_RS01855 | Not Available | Negative | 382330 - 383556 | 44563.2 |
| yhfx family plp-dependent enzyme | EC382_RS01860 | Not Available | Negative | 383557 - 384720 | 42378.8 |
| prd domain-containing protein | EC382_RS01865 | Not Available | Negative | 384804 - 385166 | 13498.4 |
| hypothetical protein | EC382_RS01870 | Not Available | Negative | 385183 - 386088 | 33431.3 |
| tryptophan--trna ligase | EC382_RS01875 | Not Available | Negative | 386351 - 387355 | 37439.9 |
| phosphoglycolate phosphatase | EC382_RS01880 | Not Available | Negative | 387348 - 388106 | 27390.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





