Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yebb family permuted papain-like enzyme | EC382_RS01735 | Not Available | Positive | 358001 - 358603 | 22677.2 |
| crossover junction endodeoxyribonuclease ruvc | EC382_RS01740 | Not Available | Negative | 358605 - 359126 | 18747.9 |
| yebc/pmpr family dna-binding transcriptional regulator | EC382_RS01745 | Not Available | Negative | 359161 - 359901 | 26424.0 |
| dihydroneopterin triphosphate diphosphatase | EC382_RS01750 | Not Available | Negative | 359930 - 360382 | 17306.7 |
| aspartate--trna ligase | EC382_RS01755 | Not Available | Negative | 360500 - 362272 | 65873.2 |
| hydrolase | EC382_RS01760 | Not Available | Positive | 362582 - 363148 | 20457.3 |
| dini family protein | EC382_RS01765 | Not Available | Positive | 363466 - 363714 | 9421.31 |
| duf5339 domain-containing protein | EC382_RS01770 | Not Available | Positive | 364468 - 364746 | 10041.0 |
| hypothetical protein | EC382_RS01775 | Not Available | Negative | 365691 - 365873 | 6794.34 |
| mfs transporter tsga | EC382_RS01780 | Not Available | Positive | 366297 - 367478 | 43110.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





