Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ggdef domain-containing protein | EC382_RS01335 | Not Available | Positive | 283494 - 284984 | 56605.8 |
| mischarged aminoacyl-trna deacylase | EC382_RS01340 | Not Available | Positive | 285027 - 285530 | 17851.7 |
| hypothetical protein | EC382_RS01345 | Not Available | Negative | 285531 - 285635 | 3771.77 |
| duf441 domain-containing protein | EC382_RS01350 | Not Available | Positive | 285805 - 286251 | 15256.6 |
| helix-turn-helix transcriptional regulator | EC382_RS01355 | Not Available | Negative | 286208 - 287029 | 30472.2 |
| 2-nitroimidazole transporter | EC382_RS01360 | Not Available | Positive | 287126 - 288307 | 41195.8 |
| duf488 domain-containing protein | EC382_RS01365 | Not Available | Positive | 288362 - 288709 | 13356.9 |
| duf333 domain-containing lipoprotein yoaf | EC382_RS01370 | Not Available | Negative | 288731 - 288985 | 8962.86 |
| diguanylate cyclase dgcp | EC382_RS01375 | Not Available | Positive | 289168 - 290193 | 38495.7 |
| yoak family small membrane protein | EC382_RS01380 | Not Available | Positive | 290226 - 290324 | 3458.45 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





