Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginine n-succinyltransferase | EC382_RS01135 | Not Available | Negative | 240390 - 241424 | 38470.0 |
| succinylornithine/acetylornithine transaminase | EC382_RS01140 | Not Available | Negative | 241421 - 242641 | 43557.7 |
| exodeoxyribonuclease iii | EC382_RS01145 | Not Available | Positive | 243087 - 243893 | 30924.8 |
| tvp38/tmem64 family protein | EC382_RS01150 | Not Available | Positive | 244060 - 244770 | 26097.8 |
| protein ydjy | EC382_RS01155 | Not Available | Positive | 244775 - 245452 | 24228.8 |
| tvp38/tmem64 family protein | EC382_RS01160 | Not Available | Positive | 245467 - 246174 | 26158.8 |
| carboxymuconolactone decarboxylase family protein | EC382_RS01165 | Not Available | Positive | 246174 - 246722 | 20568.1 |
| abc transporter substrate-binding protein | EC382_RS01170 | Not Available | Positive | 246732 - 247898 | 42849.7 |
| abc transporter permease | EC382_RS01175 | Not Available | Positive | 247871 - 249406 | 56242.1 |
| atp-binding cassette domain-containing protein | EC382_RS01180 | Not Available | Positive | 249406 - 250059 | 23956.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





