Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l35 | EC382_RS00985 | Not Available | Negative | 210663 - 210860 | 7289.38 |
| translation initiation factor if-3 | EC382_RS00990 | Not Available | Negative | 210957 - 211499 | 20565.2 |
| threonine--trna ligase | EC382_RS00995 | Not Available | Negative | 211503 - 213431 | 74018.4 |
| shet2/espl2 family type iii secretion system effector toxin | EC382_RS01000 | Not Available | Positive | 213954 - 215852 | 71075.3 |
| hypothetical protein | EC382_RS01005 | Not Available | Positive | 216027 - 216134 | 4115.44 |
| ydiy family protein | EC382_RS01010 | Not Available | Negative | 216187 - 216945 | 27599.6 |
| 6-phosphofructokinase ii | EC382_RS01015 | Not Available | Positive | 217232 - 218161 | 32457.9 |
| type v toxin-antitoxin system endoribonuclease antitoxin ghos | EC382_RS01020 | Not Available | Positive | 218262 - 218552 | 10865.6 |
| fructosamine kinase family protein | EC382_RS01025 | Not Available | Positive | 218658 - 219518 | 32460.3 |
| hypothetical protein | EC382_RS01030 | Not Available | Negative | 219559 - 220095 | 20386.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





