Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| major capsid protein | EC382_RS26360 | Not Available | Positive | 5373833 - 5374277 | 16955.0 |
| porin family protein | EC382_RS26365 | Not Available | Negative | 5374278 - 5374713 | 16339.7 |
| calcium-binding protein | EC382_RS26370 | Not Available | Negative | 5374714 - 5375149 | 15619.7 |
| major capsid protein e | EC382_RS26375 | Not Available | Positive | 5375150 - 5375584 | 16603.3 |
| phage tail tape measure protein | EC382_RS26380 | Not Available | Negative | 5375585 - 5376017 | 14850.6 |
| hypothetical protein | EC382_RS26385 | Not Available | Positive | 5376030 - 5376269 | 9245.84 |
| colicin v secretion protein cvaa | EC382_RS26390 | Not Available | Positive | 5376875 - 5377284 | 15671.5 |
| hypothetical protein | EC382_RS26395 | Not Available | Positive | 5377816 - 5378093 | 10093.4 |
| hypothetical protein | EC382_RS26400 | Not Available | Positive | 5378094 - 5378495 | 13361.3 |
| type vi secretion system atpase tssh | EC382_RS26405 | Not Available | Positive | 5379294 - 5379688 | 14737.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





