Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage tail protein | EC382_RS26105 | Not Available | Positive | 5349800 - 5350438 | 21457.5 |
| is66 family insertion sequence hypothetical protein | EC382_RS26110 | Not Available | Positive | 5350487 - 5350912 | 15838.0 |
| is66 family insertion sequence element accessory protein tnpb | EC382_RS26115 | Not Available | Positive | 5350909 - 5351086 | 6641.1 |
| hemagglutinin | EC382_RS26120 | Not Available | Positive | 5351087 - 5351722 | 20682.9 |
| phage tail protein | EC382_RS26125 | Not Available | Negative | 5351723 - 5351867 | 5091.86 |
| dna-packaging protein fi | EC382_RS26130 | Not Available | Negative | 5351860 - 5352243 | 13849.2 |
| tigr03757 family integrating conjugative element protein | EC382_RS26135 | Not Available | Negative | 5352349 - 5352506 | 5780.0 |
| arac family transcriptional regulator | EC382_RS26140 | Not Available | Negative | 5352642 - 5352962 | 12153.8 |
| terminase small subunit | EC382_RS26145 | Not Available | Negative | 5352963 - 5353375 | 15170.2 |
| type i secretion system permease/atpase | EC382_RS26150 | Not Available | Negative | 5353576 - 5354186 | 23120.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





