Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| collagen-like protein | EC382_RS26055 | Not Available | Positive | 5344310 - 5344726 | 14171.4 |
| tail fiber assembly protein | EC382_RS26060 | Not Available | Positive | 5344768 - 5345022 | 9394.97 |
| transposase | EC382_RS26065 | Not Available | Positive | 5345126 - 5345545 | 15680.8 |
| is66 family insertion sequence element accessory protein tnpb | EC382_RS26070 | Not Available | Positive | 5345542 - 5345722 | 6754.27 |
| dna topoisomerase iii | EC382_RS26075 | Not Available | Positive | 5345723 - 5346406 | 25371.3 |
| type iv secretion system dna-binding domain-containing protein | EC382_RS26080 | Not Available | Positive | 5346407 - 5347086 | 25810.4 |
| tail fiber protein | EC382_RS26085 | Not Available | Positive | 5347140 - 5347764 | 21478.5 |
| hypothetical protein | EC382_RS26090 | Not Available | Negative | 5347765 - 5348441 | 25339.6 |
| phage tail protein | EC382_RS26095 | Not Available | Negative | 5348453 - 5349116 | 23953.7 |
| duf1737 domain-containing protein | EC382_RS26100 | Not Available | Positive | 5349629 - 5349789 | 5908.06 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





