Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l,d-transpeptidase ldte | EC382_RS00785 | Not Available | Negative | 168579 - 169583 | 36070.4 |
| cysteine desulfuration protein sufe | EC382_RS00790 | Not Available | Negative | 169732 - 170148 | 15787.2 |
| cysteine desulfurase sufs | EC382_RS00795 | Not Available | Negative | 170161 - 171381 | 44497.4 |
| fe-s cluster assembly protein sufd | EC382_RS00800 | Not Available | Negative | 171378 - 172649 | 46844.6 |
| fe-s cluster assembly atpase sufc | EC382_RS00805 | Not Available | Negative | 172624 - 173370 | 27531.0 |
| fe-s cluster assembly protein sufb | EC382_RS00810 | Not Available | Negative | 173380 - 174867 | 54748.1 |
| fe-s cluster assembly scaffold sufa | EC382_RS00815 | Not Available | Negative | 174876 - 175244 | 13286.8 |
| hypothetical protein | EC382_RS00820 | Not Available | Negative | 175793 - 175981 | 7266.74 |
| 1,4-dihydroxy-2-naphthoyl-coa hydrolase | EC382_RS00825 | Not Available | Negative | 176081 - 176491 | 14960.2 |
| fad-binding oxidoreductase | EC382_RS00830 | Not Available | Negative | 176488 - 179544 | 113270.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





