Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ompa family protein | EC382_RS25640 | Not Available | Positive | 5289569 - 5290763 | 44093.9 |
| hypothetical protein | EC382_RS25645 | Not Available | Positive | 5292072 - 5292314 | 9237.01 |
| luxr family transcriptional regulator | EC382_RS25650 | Not Available | Negative | 5293387 - 5293863 | 18184.5 |
| hypothetical protein | EC382_RS25655 | Not Available | Negative | 5293926 - 5294132 | 7754.16 |
| hypothetical protein | EC382_RS25660 | Not Available | Negative | 5294260 - 5294376 | 4051.6 |
| type vi secretion system tip protein vgrg | EC382_RS25665 | Not Available | Positive | 5294377 - 5295443 | 38692.8 |
| host specificity protein j | EC382_RS25670 | Not Available | Negative | 5295548 - 5296673 | 40812.8 |
| host specificity protein j | EC382_RS25675 | Not Available | Positive | 5296674 - 5297799 | 40959.9 |
| type vi secretion system atpase tssh | EC382_RS25680 | Not Available | Negative | 5297800 - 5298314 | 19388.2 |
| type vi secretion system tube protein hcp | EC382_RS25685 | Not Available | Negative | 5298483 - 5298923 | 16877.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





